Maldonado JA, Marcos M, Fernández-Breis JT, Giménez-Solano VM, Legaz-García MC, Martínez-Salvador B. A platform for the design and execution of clinical data transformation and reasoning workflows. II workshop IA-Biomed.

Pérez-Sanz F, Riquelme-Pérez M, Martínez-Barba E, de la Peña-Moral J, Salazar Nicolás A, Carpes-Ruiz M, Esteban-Gil A, Legaz-García MDC, Parreño-González MA, Ramírez P, Martínez CM. Efficiency of Machine Learning Algorithms for the Determination of Macrovesicular Steatosis in Frozen Sections Stained with Sudan to Evaluate the Quality of the Graft in Liver Transplantation. Sensors (Basel). 2021 Mar 12;21(6):1993. (impact factor 2021: 3,847)

Maldonado JA, Marcos M, Fernández-Breis JT, Giménez-Solano VM, Legaz-García MC, Martínez-Salvador B. CLIN-IK-LINKS: A platform for the design and execution of clinical data transformation and reasoning workflows, Computer Methods and Programs in Biomedicine 197: 105616 (IF 2020: 5.428)

Esteban-Gil A, Pérez-Sanz F, García-Solano J, Alburquerque-González B, Parreño-González M, Legaz-García MC, Fernandez-Breis JT, Rodríguez-Braun E, Pimentel P, Mäkinen M, Tuomisto A, Slaby O, Conesa-Zamora P, ColPortal, an integrative multiomic platform for analysing epigenetic interactions in colorectal cancer, Scientific Data 6, 255(impact factor 2019: 5,541)

Bernabé-Díaz JA, Legaz-García MC, García JM, Fernández-Breis JT Efficient, semantics-rich transformation and integration of large datasets, Expert Systems with Applications 133(1):198-214(impact factor 2019: 5,452)

Fernández-Breis JT, Menárguez-Tortosa M, Martínez-Costa C, Miñarro-Giménez JA, Legaz-García MC, Quesada-MArtínez M, Duque-Ramos A, Esteban-Gil A, Castellanos-Nieves D. Tecnologías para el Modelado, Procesamiento y Gestión de Conocimiento, IA-Biomed, CAEPIA 2018

Bernabé-Díaz JA, Legaz-García MC, García JM, Fernández-Breis JT. Application of High Performance Computing Techniques to the Semantic Data Transformation, Trends and Advances in Information Systems and Technologies (745):691-700

Bernabé-Díaz JA, Legaz-García MC, García JM, Fernández-Breis JT. Optimizing Semantic Data Transformation using High Performance Computing Techniques, SWAT4LS

Legaz-García MC, Dentler K, Fernández-Breis JT, Cornet R, Combining archetypes, ontologies and formalization enables automated computation of quality indicators, Studies in Health Technology and Informatics 235: 416 - 420

Maldonado JA, Marcos M, Fernández-Breis JT, Parcero E, Boscá D, Legaz-García MC, Martínez-Salvador B, Robles M, A platform for exploration into chaining of web services for clinical data transformation and reasoning, AMIA Annual Symposium 2016

Fernandez-Breis JT, Chiba H, Legaz-García MC, Uchiyama I, The Orthology Ontology: development and applications, Journal of Biomedical Semantics 2016, 7:34 (impact factor 2016:1,845)

Legaz-García MC, Miñarro-Giménez JA, Menárguez-Tortosa M., Fernández-Breis JT. Generation of Open Biomedical Datasets through Ontology-Driven Transformation and Integration Processes, Journal of Biomedical Semantics 2016,7:32(impact factor 2016:1,845)

Legaz-García MC, Martínez-Costa C, Menárguez-Tortosa M., Fernández-Breis JT. A Semantic Web based Framework for the Interoperability and Exploitation of Clinical Models and EHR Data, Knowledge-based Systems 105 (2016):175-189 (impact factor 2016:4,529)

Jesualdo Tomás Fernández-Breis, María Del Carmen Legaz-García, Hirokazu Chiba and Ikuo Uchiyama, Towards the semantic standardization of orthology content, SWAT4LS

Legaz-García, MC, Menárguez-Tortosa, M., Fernández-Breis, J.T., Chute, C., Tao, C. Transformation of Standardized Clinical Models based on OWL technologies: from CEM to OpenEHR archetypes, Journal of the American Medical Informatics Association (JAMIA) 22 (3): 536-544(impact factor 2014: 3,504)

Mari Carmen Legaz-García, José Antonio Miñarro-Giménez, Marcos Menárguez-Tortosa, Jesualdo Tomás Fernández-Breis, Lessons learned in the generation of biomedical research datasets using Semantic Open Data technologies, Medical Informatics Europe 2015, Studies in Health Technology and Informatics 2010:165-169

Legaz-García M.C, Martínez-Costa C., Miñarro-Giménez JA,Fernández-Breis, J.T., Schulz, S. Menárguez-Tortosa, M.Ontology patterns-based transformation of clinical information, Medical Informatics Europe 2014

Martínez-Costa C., Legaz-García M.C., Schulz S., Fernández-Breis, J.T. Ontology-based Infrastructure for a Meaningful EHR Representation and Use, EEE-EMBS International Conferences on Biomedical and Health Informatics (BHI)

Jesualdo Tomás Fernández-Breis, José Alberto Maldonado, Mar Marcos, María del Carmen Legaz-García, David Moner, Joaquín Torres-Sospedra, Ángel Esteban-Gil, Begoña Martínez-Salvador, Montserrat Robles. Leveraging Electronic Healthcare Record Standards and Semantic Web Technologies for the Identification of Patient Cohorts. Journal of the American Medical Informatics Association (JAMIA) (impact factor 2012: 3,517)

Catalina Martínez-Costa, Diego Bosca, Mari Carmen Legaz-García, Cui Tao, Jesualdo Tomás Fernández Breis, Stefan Schulz, Christopher G. Chute, Isosemantic rendering of clinical information using formal ontologies and RDF, Medinfo 2013

Mari Carmen Legaz-García, Cui Tao, Marcos Menárguez-Tortosa, Jesualdo Tomás Fernández-Breis, Christopher G. Chute. An Approach for the Mapping of CEM and OpenEHR Archetypes. AMIA CRI 2013, poster

María del Carmen Legaz-García,José Antonio Miñarro-Giménez, Marisa Madrid, Marcos Menárguez-Tortosa, Santiago Torres Martínez, Jesualdo Tomás Fernández-Breis. Linking Genome Annotation Projects with Genetic Disorders using Ontologies, Journal of Medical Systems Volume 36 Supplement 1:11-23 (impact factor 2011:1,132)

María del Carmen Legaz García, Catalina Martínez-Costa, Marcos Menárguez-Tortosa, Jesualdo Tomás Fernandez-Breis. Recommendation of Standardized Health Learning Contents using Archetypes and Semantic Web Technologies, MIE 2012, Studies in Health Technology and Informatics 180:963-967

María del Carmen Legaz-García, Catalina Martínez-Costa, Marcos Menárguez-Tortosa, Jesualdo Tomás Fernández-Breis. Exploitation of ontologies for the management of clinical archetypes in ArchMS, ICBO 2012

María del Carmen Legaz-García, Catalina Martínez-Costa, Marcos Menárguez-Tortosa, Jesualdo Tomás Fernández-Breis, Towards semantic platforms for archetype management: ArchMS, OpenHealth 2011, Barcelona, Spain.

Maria del Carmen Legaz Garcia, Jose Antonio Miñarro Giménez, Marisa Madrid, Santiago Torres Martinez and Jesualdo Tomás Fernández-Breis. Using Ontologies for Supporting Genomic Sequence Annotation Project. SATBI 2011

J.T. Fernández-Breis, M.Madrid, J.A. Miñarro-Giménez, M.C. Legaz-García, M. Egaña Aranguren, R. Stevens. Exploitation of Semantic Gene Ontology Annotations for Schizosaccharomyces Pombe. 6th International Fission Yeast Meeting. Poster.